Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788678.1_cds_XP_016475443.1_633
CDS Infomation

[gene=LOC107797025] [db_xref=GeneID:107797025] [protein=phytoene synthase 2, chloroplastic-like] [protein_id=XP_016475443.1] [location=join(10307..10712,10839..10889,11668..11840,11970..12205,12430..12622,13348..13521)] [gbkey=CDS]
Sequence

ATGTCTGTTGCCTTGTTATGGGTTGTTTCACCTTGTGAAGTCTCAAATGGGACAGGATTC
TTGGATTCAGTCCGGGAGGGAAACCGGGTTTTTGATTCGTCGAGGCATAGGAATTTAGTG
TGCAATGAGAGAAACAAGAGAGGTGTGAAACAAAGGTGGAATTTTGGTTCTGTAAGGTCT
GCTATGGTGGCTACACCGGCGGGAGAAATGGCGACGATGACATCAGAACAGATGGTTTAT
GATGTGGTTTTAAAACAAGCAGCTTTAGTGAAGAGGCAGTTGAGATCTGCTGATGATTTA
GAAGTGAAGCCGGAGATCCCTCTCCCCGGGAATTTGAGCTTGTTGAGTGAAGCATATGAT
AGGTGTAGTGAAGTATGTGCAGAGTATGCAAAGACATTTTACTTAGGAACCATGCTAATG
ACTCCAGAGAGAAGAAGGGCTATTTGGGCAATATATGTGTGGTGCAGGAGAACAGATGAA
CTTGTTGATGGCCCAAACGCATCACATATTACACCCCAAGCCTTAGATAGGTGGGAAGAC
CGGCTTGAAGATGTTTTCAGCGGGCGACCATTTGATATGCTCGATGCTGCTTTGTCCGAT
ACTGTTTCCAAGTTTCCAGTTGATATTCAGCCGTTCAGAGATATGATTGAAGGAATGCGT
ATGGACTTGAGGAAGTCAAGATATAGAAACTTTGATGAGCTTTACCTCTATTGTTATTAC
GTTGCTGGTACGGTTGGGTTGATGAGTGTTCCAATTATGGGTATTGCACCTGATTCAAAG
GCAACAACAGAGAGCGTATATAATGCAGCTTTGGCTTTAGGAATCGCAAATCAACTAACG
AACATACTCAGAGATGTTGGAGAAGATGCCAGAAGAGGAAGAGTCTACTTACCTCAAGAT
GAATTAGCACAGGCAGGTCTCTTCGACGATGACATATTTGCTGGAAAAGTGACTGATAAG
TGGAGAAGCTTTATGAAGAAGCAAATCCAGAGGGCAAGAAAGTTCTTCGATGAGGCAGAG
GAAGGAGTTACACAACTGAGCTCAGCTAGCAGATGGCCTGTATGGGCATCTTTGCTGTTG
TACCGCCAAATACTGGACGAGATTGAAGCCAATGACTACAACAACTTCACAAAGAGAGCT
TATGTGAGCAAACCAAAGAAGCTAATTTCCTTACCTATTGCTTATGCAAAATCTCTTGTG
CCCCCTACAAGAACTCTTGTCACCTCTAGCTAA

Peptide Sequence

PEP ID

XP_016475443.1
PEP Infomation

PREDICTED: phytoene synthase 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MSVALLWVVSPCEVSNGTGFLDSVREGNRVFDSSRHRNLVCNERNKRGVKQRWNFGSVRS
AMVATPAGEMATMTSEQMVYDVVLKQAALVKRQLRSADDLEVKPEIPLPGNLSLLSEAYD
RCSEVCAEYAKTFYLGTMLMTPERRRAIWAIYVWCRRTDELVDGPNASHITPQALDRWED
RLEDVFSGRPFDMLDAALSDTVSKFPVDIQPFRDMIEGMRMDLRKSRYRNFDELYLYCYY
VAGTVGLMSVPIMGIAPDSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQD
ELAQAGLFDDDIFAGKVTDKWRSFMKKQIQRARKFFDEAEEGVTQLSSASRWPVWASLLL
YRQILDEIEANDYNNFTKRAYVSKPKKLISLPIAYAKSLVPPTRTLVTSS

Transcript Sequence

Gene sequence data has not been registered.